<![CDATA[Multiwfn forum / sobEDA promol.gjf coordinate issue]]> //www.umsyar.com/wfnbbs/viewtopic.php?id=966 The most recent posts in sobEDA promol.gjf coordinate issue. Tue, 27 Feb 2024 08:46:06 +0000 FluxBB <![CDATA[Re: sobEDA promol.gjf coordinate issue]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=3692#p3692

Thank you for your kindness :) The calculations have been successfully completed.

Best regards,
Kang

dummy@example.com (kang) Tue, 27 Feb 2024 08:46:06 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=3692#p3692
<![CDATA[Re: sobEDA promol.gjf coordinate issue]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=3687#p3687

Hello,

Your system.xyz is problematic. This file actually contains four atoms, however the first line is 2, it should be replaced with 4.

dummy@example.com (sobereva) Mon, 26 Feb 2024 19:48:10 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=3687#p3687
<![CDATA[sobEDA promol.gjf coordinate issue]]> //www.umsyar.com/wfnbbs/viewtopic.php?pid=3683#p3683

Dear SobEDA developer,

I encountered the following error while performing some calculations. Upon checking the log file, it seemed that there was an error in the input geometry during the process of creating promol.gjf, resulting in an error. Geometry of first fragment is duplicated..

Could you provide a guidance on how to resolve this issue?

Thank you.



-------------------------------------------------------------------------------------
#### fragment.txt ####
2
1 1
1-2
-1 1
3-4
-------------------------------------------------------------------------------------
#### system.xyz ####
2
-150.53538671576817
O    0.000000000000    0.400000000000    0.000000000000
H   -0.891168934258    1.003844857836    0.000000000000
O    0.000000000000   -0.400000000000    0.000000000000
H    0.891168934258   -1.003844857836    0.000000000000
-------------------------------------------------------------------------------------
#### promol.gjf ####
%oldchk=promol.chk
#p b3lyp/6-31G* em=gd3bj ExtraLinks=L608 nosymm scf=maxcyc=-1 guess=read iop(4/6=222)

opted geometry

  0  1
O      0.00000000    0.40000000    0.00000000  ㅜ fragment 1 geometry
H     -0.89116893    1.00384486    0.00000000  ㅗ
O      0.00000000    0.40000000    0.00000000  ㅜ  duplicated same geometry
H     -0.89116893    1.00384486    0.00000000  ㅗ

-5 5
-------------------------------------------------------------------------------------

Detail output files are on google drive :

https://drive.google.com/drive/folders/ … sp=sharing

dummy@example.com (kang) Mon, 26 Feb 2024 17:12:58 +0000 //www.umsyar.com/wfnbbs/viewtopic.php?pid=3683#p3683
Baidu
map